.. ****************************************************************************** .. * Copyright 2020 Intel Corporation .. * .. * Licensed under the Apache License, Version 2.0 (the "License"); .. * you may not use this file except in compliance with the License. .. * You may obtain a copy of the License at .. * .. * http://www.apache.org/licenses/LICENSE-2.0 .. * .. * Unless required by applicable law or agreed to in writing, software .. * distributed under the License is distributed on an "AS IS" BASIS, .. * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. .. * See the License for the specific language governing permissions and .. * limitations under the License. .. *******************************************************************************/ Batch Processing ================ Algorithm Input *************** The correlation and variance-covariance matrices algorithm accepts the input described below. Pass the ``Input ID`` as a parameter to the methods that provide input for your algorithm. .. tabularcolumns:: |\Y{0.2}|\Y{0.8}| .. list-table:: Algorithm Input for Correlation and Variance-Covariance Matrices Algorithm (Batch Processing) :header-rows: 1 :align: left :widths: 10 60 * - Input ID - Input * - ``data`` - Pointer to the :math:`n \times p` numeric table for which the variance-covariance or correlation matrix :math:`C` is computed. While the input for ``defaultDense``, ``singlePassDense``, or ``sumDense`` method can be an object of any class derived from ``NumericTable``, the input for ``fastCSR``, ``singlePassCSR``, or ``sumCSR`` method can only be an object of the ``CSRNumericTable`` class. Algorithm Parameters ******************** The correlation and variance-covariance matrices algorithm has the following parameters: .. tabularcolumns:: |\Y{0.2}|\Y{0.2}|\Y{0.6}| .. list-table:: Algorithm Parameters for Correlation and Variance-Covariance Matrices Algorithm (Batch Processing) :header-rows: 1 :align: left :widths: 10 20 30 :class: longtable * - Parameter - Default Value - Description * - ``algorithmFPType`` - ``float`` - The floating-point type that the algorithm uses for intermediate computations. Can be ``float`` or ``double``. * - ``method`` - ``defaultDense`` - Available methods for computation of correlation and variance-covariance matrices: For CPU: + ``defaultDense`` - default performance-oriented method + ``singlePassDense`` - implementation of the single-pass algorithm proposed by D.H.D. West + ``sumDense`` - implementation of the algorithm in the cases where the basic statistics associated with the numeric table are pre-computed sums; returns an error if pre-computed sums are not defined + ``fastCSR`` - performance-oriented method for CSR numeric tables + ``singlePassCSR`` - implementation of the single-pass algorithm proposed by D.H.D. West; optimized for CSR numeric tables + ``sumCSR`` - implementation of the algorithm in the cases where the basic statistics associated with the numeric table are pre-computed sums; optimized for CSR numeric tables; returns an error if pre-computed sums are not defined For GPU: + ``defaultDense`` - default performance-oriented method * - ``outputMatrixType`` - ``covarianceMatrix`` - The type of the output matrix. Can be: + ``covarianceMatrix`` - variance-covariance matrix + ``correlationMatrix`` - correlation matrix Algorithm Output **************** The correlation and variance-covariance matrices algorithm calculates the result described below. Pass the ``Result ID`` as a parameter to the methods that access the results of your algorithm. .. tabularcolumns:: |\Y{0.2}|\Y{0.8}| .. list-table:: Algorithm Output for Correlation and Variance-Covariance Matrices Algorithm (Batch Processing) :header-rows: 1 :align: left :widths: 10 60 :class: longtable * - Result ID - Result * - ``covariance`` - Use when outputMatrixType=covarianceMatrix. Pointer to the numeric table with the :math:`p \times p` variance-covariance matrix. .. note:: By default, this result is an object of the ``HomogenNumericTable`` class, but you can define the result as an object of any class derived from ``NumericTable`` except ``PackedTriangularMatrix`` and ``CSRNumericTable``. * - ``correlation`` - Use when outputMatrixType=correlationMatrix. Pointer to the numeric table with the :math:`p \times p` correlation matrix. .. note:: By default, this result is an object of the ``HomogenNumericTable`` class, but you can define the result as an object of any class derived from ``NumericTable`` except ``PackedTriangularMatrix`` and ``CSRNumericTable``. * - ``mean`` - Pointer to the :math:`1 \times p` numeric table with means. .. note:: By default, this result is an object of the ``HomogenNumericTable`` class, but you can define the result as an object of any class derived from ``NumericTable`` except ``PackedTriangularMatrix``, ``PackedSymmetricMatrix``, and ``CSRNumericTable``. .. include:: ../../../opt-notice.rst